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    Pnliprp2 pancreatic lipase-related protein 2 [ Mus musculus (house mouse) ]

    Gene ID: 18947, updated on 27-Nov-2024

    Summary

    Official Symbol
    Pnliprp2provided by MGI
    Official Full Name
    pancreatic lipase-related protein 2provided by MGI
    Primary source
    MGI:MGI:1336202
    See related
    Ensembl:ENSMUSG00000025091 AllianceGenome:MGI:1336202
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PLRP2
    Summary
    Enables triacylglycerol lipase activity. Acts upstream of or within cellular defense response; intestinal lipid catabolic process; and response to bacterium. Predicted to be located in neuron projection and zymogen granule membrane. Predicted to be active in extracellular space. Is expressed in pancreas tip epithelium. Orthologous to human PNLIPRP2 (pancreatic lipase related protein 2 (gene/pseudogene)). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in small intestine adult (RPKM 66.4), stomach adult (RPKM 31.6) and 4 other tissues See more
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    Genomic context

    See Pnliprp2 in Genome Data Viewer
    Location:
    19 D2; 19 54.5 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (58748155..58765966)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (58759723..58777534)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1810018F18 gene Neighboring gene pancreatic lipase related protein 1 Neighboring gene STARR-seq mESC enhancer starr_46584 Neighboring gene predicted gene, 52394 Neighboring gene sperm microtubule inner protein 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calcium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables calcium ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables galactolipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables galactolipase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables galactolipase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables lipase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables lipoprotein lipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables monoacylglycerol lipase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables monoacylglycerol lipase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables phospholipase A1 activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phospholipase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables phospholipase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables triacylglycerol lipase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables triacylglycerol lipase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular defense response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cholesterol homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in fatty acid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in galactolipid catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in galactolipid catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in high-density lipoprotein particle remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within intestinal lipid catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in phosphatidylcholine catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phosphatidylcholine catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in phospholipid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phospholipid catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phospholipid catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in phospholipid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phospholipid metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in triglyceride catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in triglyceride catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in triglyceride catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in triglyceride catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in neuron projection ISO
    Inferred from Sequence Orthology
    more info
     
    located_in neuron projection ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in zymogen granule membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in zymogen granule membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    pancreatic lipase-related protein 2
    Names
    PL-RP2
    cytotoxic T-lymphocyte lipase
    galactolipase
    triacylglycerol lipase
    NP_035258.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011128.2NP_035258.2  pancreatic lipase-related protein 2 precursor

      See identical proteins and their annotated locations for NP_035258.2

      Status: VALIDATED

      Source sequence(s)
      AK008021, AK131882, BC094923
      Consensus CDS
      CCDS38030.1
      UniProtKB/Swiss-Prot
      P17892, Q4VBW7
      Related
      ENSMUSP00000026081.4, ENSMUST00000026081.5
      Conserved Domains (3) summary
      cd00707
      Location:65363
      Pancreat_lipase_like; Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the ...
      cd01759
      Location:370482
      PLAT_PL; PLAT/LH2 domain of pancreatic triglyceride lipase. Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of ...
      pfam00151
      Location:31367
      Lipase; Lipase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      58748155..58765966
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)