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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001136026.3 → NP_001129498.1 protein SEC13 homolog isoform 3
See identical proteins and their annotated locations for NP_001129498.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
AK301999, BC091506
- Consensus CDS
-
CCDS63540.1
- UniProtKB/TrEMBL
-
Q53GB2
- Related
- ENSP00000373312.2, ENST00000383801.6
- Conserved Domains (2) summary
-
- sd00039
Location:107 → 147
- 7WD40; WD40 repeat [structural motif]
- cl25539
Location:56 → 335
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001136232.3 → NP_001129704.1 protein SEC13 homolog isoform 2
See identical proteins and their annotated locations for NP_001129704.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and the 5' coding region, and initiates translation at a downstream start codon compared to variant 3. It encodes isoform 2 which has a shorter N-terminus, compared to isoform 3.
- Source sequence(s)
-
AF052155, BC002634
- Consensus CDS
-
CCDS46751.1
- UniProtKB/TrEMBL
-
Q53GB2
- Related
- ENSP00000380298.3, ENST00000397109.7
- Conserved Domains (2) summary
-
- sd00039
Location:47 → 87
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:11 → 275
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_001278946.2 → NP_001265875.1 protein SEC13 homolog isoform 5
See identical proteins and their annotated locations for NP_001265875.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in both UTRs and the 5' and 3' coding regions, compared to variant 3. It encodes isoform 5 which is shorter and has distinct N- and C-termini, compared to isoform 3.
- Source sequence(s)
-
AA682381, AC022384, AK294662, CN344033
- UniProtKB/TrEMBL
-
A8MWR8
- Related
-
ENST00000397105.7
- Conserved Domains (3) summary
-
- COG2319
Location:24 → 155
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:61 → 101
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:25 → 129
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_030673.4 → NP_109598.2 protein SEC13 homolog isoform 4
See identical proteins and their annotated locations for NP_109598.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate splice site in the 5' coding region and initiates translation at a downstream start codon, compared to variant 3. It encodes isoform 4, which is shorter at the N-terminus compared to isoform 3.
- Source sequence(s)
-
BC002634, BC091506, CN344033
- UniProtKB/TrEMBL
-
Q53GB2
- Related
- ENSP00000336566.4, ENST00000337354.8
- Conserved Domains (3) summary
-
- COG2319
Location:9 → 304
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:64 → 104
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:13 → 292
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_183352.3 → NP_899195.1 protein SEC13 homolog isoform 1
See identical proteins and their annotated locations for NP_899195.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) differs in the 5' UTR and lacks an exon in the 5' coding region, compared to variant 3. It encodes isoform 1 which has a shorter and distinct N-terminus, compared to isoform 3.
- Source sequence(s)
-
BC091506, CN344033
- Consensus CDS
-
CCDS2599.1
- UniProtKB/Swiss-Prot
- A8MV37, B4DXJ1, P55735, Q5BJF0, Q9BRM6, Q9BUG7
- UniProtKB/TrEMBL
-
Q53GB2
- Related
- ENSP00000312122.4, ENST00000350697.8
- Conserved Domains (2) summary
-
- sd00039
Location:61 → 101
- 7WD40; WD40 repeat [structural motif]
- cl29593
Location:10 → 289
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...