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    VN1R10P vomeronasal 1 receptor 10 pseudogene [ Homo sapiens (human) ]

    Gene ID: 387316, updated on 10-Dec-2024

    Summary

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    Official Symbol
    VN1R10Pprovided by HGNC
    Official Full Name
    vomeronasal 1 receptor 10 pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:13550
    See related
    AllianceGenome:HGNC:13550
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FKSG83; VNR6I1P; b24o18.2; hs6V1-1p
    Summary
    Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See VN1R10P in Genome Data Viewer
    Location:
    6p22.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (27324761..27325963)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (27193887..27195089)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (27292540..27293742)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Ser (anticodon GCT) 2-1 Neighboring gene POM121 transmembrane nucleoporin like 2 Neighboring gene uncharacterized LOC105375107 Neighboring gene Sharpr-MPRA regulatory region 151 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17024 Neighboring gene tRNA-iMet (anticodon CAT) 1-5 Neighboring gene tRNA-Lys (anticodon TTT) 6-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The palmitoyl acyltransferase HIP14 shares a high proportion of interactors with huntingtin: implications for a role in the pathogenesis of Huntington's disease. Butland SL, et al. Hum Mol Genet, 2014 Aug 1. PMID 24705354, Free PMC Article
    2. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995
    3. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Other Names

    • vomeronasal 1 receptor 1 pseudogene
    • vomeronasal olfactory receptor, (chromosome 6) subtype I, member 1 pseudogene

    Clone Names

    • MGC129573

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045612.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AF336874, AF352327, BC107050

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      27324761..27325963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      27193887..27195089
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_015638.1: Suppressed sequence

      Description
      NG_015638.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.

    2. NM_032030.2: Suppressed sequence

      Description
      NM_032030.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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