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    Fgf14 fibroblast growth factor 14 [ Mus musculus (house mouse) ]

    Gene ID: 14169, updated on 27-Nov-2024

    Summary

    Official Symbol
    Fgf14provided by MGI
    Official Full Name
    fibroblast growth factor 14provided by MGI
    Primary source
    MGI:MGI:109189
    See related
    Ensembl:ENSMUSG00000025551 AllianceGenome:MGI:109189
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fhf4; FHF-4; Fgf1b; FGF-14; mFHF-4(1B); Tg(tetO-MAPT*P301L)4510Kha
    Summary
    Predicted to enable growth factor activity; heparin binding activity; and sodium channel regulator activity. Acts upstream of or within several processes, including adult locomotory behavior; neuromuscular process; and positive regulation of sodium ion transport. Located in cytosol and nucleus. Is expressed in several structures, including alimentary system; brain; cardiovascular system; respiratory system; and sensory organ. Used to study Alzheimer's disease; frontotemporal dementia; and spinocerebellar ataxia type 27. Human ortholog(s) of this gene implicated in autosomal dominant cerebellar ataxia. Orthologous to human FGF14 (fibroblast growth factor 14). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in cerebellum adult (RPKM 4.3), cortex adult (RPKM 2.4) and 7 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Fgf14 in Genome Data Viewer
    Location:
    14 E5; 14 66.18 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (124211257..124915098, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (123974441..124677686, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_37795 Neighboring gene STARR-seq mESC enhancer starr_37796 Neighboring gene integrin, beta-like 1 Neighboring gene basic transcription factor 3, pseudogene 4 Neighboring gene STARR-seq mESC enhancer starr_37797 Neighboring gene RIKEN cDNA 1700024B18 gene Neighboring gene predicted gene, 25272 Neighboring gene STARR-seq mESC enhancer starr_37799 Neighboring gene STARR-seq mESC enhancer starr_37800 Neighboring gene predicted gene 15422 Neighboring gene STARR-seq mESC enhancer starr_37801 Neighboring gene predicted gene, 53849 Neighboring gene STARR-seq mESC enhancer starr_37802 Neighboring gene STARR-seq mESC enhancer starr_37804 Neighboring gene STARR-seq mESC enhancer starr_37805 Neighboring gene olfactory receptor family 6 subfamily C member 220, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_37806 Neighboring gene STARR-seq mESC enhancer starr_37807

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC129318, MGC129319

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    NOT enables fibroblast growth factor receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables growth factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables heparin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables sodium channel regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    fibroblast growth factor 14
    Names
    fibroblast growth factor 1b
    fibroblast growth factor homologous factor 4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010201.5NP_034331.2  fibroblast growth factor 14 isoform a

      See identical proteins and their annotated locations for NP_034331.2

      Status: VALIDATED

      Source sequence(s)
      AC154195, AC161001
      Consensus CDS
      CCDS27356.1
      UniProtKB/Swiss-Prot
      P70379, Q3KNZ6, Q8BST0, Q9JHL9
      UniProtKB/TrEMBL
      A0A0R4J063
      Related
      ENSMUSP00000026631.6, ENSMUST00000026631.6
      Conserved Domains (1) summary
      pfam00167
      Location:72197
      FGF; Fibroblast growth factor
    2. NM_207667.4NP_997550.1  fibroblast growth factor 14 isoform b

      See identical proteins and their annotated locations for NP_997550.1

      Status: VALIDATED

      Source sequence(s)
      AC154195, AC161001, AC164978
      Consensus CDS
      CCDS27355.1
      UniProtKB/TrEMBL
      O89096
      Related
      ENSMUSP00000093185.4, ENSMUST00000095529.10
      Conserved Domains (1) summary
      pfam00167
      Location:77202
      FGF; Fibroblast growth factor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      124211257..124915098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017315845.2XP_017171334.1  fibroblast growth factor 14 isoform X1

      Conserved Domains (1) summary
      smart00442
      Location:22152
      FGF; Acidic and basic fibroblast growth factor family
    2. XM_011244952.4XP_011243254.1  fibroblast growth factor 14 isoform X2

      See identical proteins and their annotated locations for XP_011243254.1

      UniProtKB/Swiss-Prot
      P70379
      Conserved Domains (1) summary
      pfam00167
      Location:1113
      FGF; Fibroblast growth factor
    3. XM_006518549.5XP_006518612.1  fibroblast growth factor 14 isoform X3

      Conserved Domains (1) summary
      cl00060
      Location:74141
      FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...