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    Defb29 defensin beta 29 [ Mus musculus (house mouse) ]

    Gene ID: 75400, updated on 9-Dec-2024

    Summary

    Official Symbol
    Defb29provided by MGI
    Official Full Name
    defensin beta 29provided by MGI
    Primary source
    MGI:MGI:1922650
    See related
    Ensembl:ENSMUSG00000044249 AllianceGenome:MGI:1922650
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BD-29; mBD-29; 0610030I09Rik
    Summary
    Predicted to be involved in defense response to bacterium and innate immune response. Predicted to be located in extracellular region. Orthologous to human DEFB116 (defensin beta 116). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward genital fat pad adult (RPKM 75.5) See more
    Orthologs
    NEW
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    Genomic context

    See Defb29 in Genome Data Viewer
    Location:
    2 H1; 2 75.24 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (152380634..152381961, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (152538714..152540041, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene defensin beta 26 Neighboring gene STARR-seq mESC enhancer starr_06063 Neighboring gene defensin beta 28 Neighboring gene predicted gene 14161 Neighboring gene STARR-seq mESC enhancer starr_06064 Neighboring gene predicted gene, 17416 Neighboring gene defensin beta 21

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001001444.2NP_001001444.1  beta-defensin 29 precursor

      See identical proteins and their annotated locations for NP_001001444.1

      Status: VALIDATED

      Source sequence(s)
      AF515626
      Consensus CDS
      CCDS38276.1
      UniProtKB/Swiss-Prot
      Q8BGW9
      UniProtKB/TrEMBL
      A3KGR0
      Related
      ENSMUSP00000052589.3, ENSMUST00000060598.4
      Conserved Domains (1) summary
      pfam13841
      Location:4068
      Defensin_beta_2; Beta defensin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      152380634..152381961 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)