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    B0511.12 Pecanex-like protein [ Caenorhabditis elegans ]

    Gene ID: 172961, updated on 2-Nov-2024

    Summary

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    Official Symbol
    B0511.12
    Official Full Name
    Pecanex-like protein
    Primary source
    WormBase:WBGene00015237
    Locus tag
    CELE_B0511.12
    See related
    AllianceGenome:WB:WBGene00015237
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in endoplasmic reticulum organization. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum. Orthologous to several human genes including PCNX2 (pecanex 2) and PCNX3 (pecanex 3). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See B0511.12 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    26
    Sequence:
    Chromosome: I; NC_003279.8 (10654299..10666945, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene DUF38 domain-containing protein Neighboring gene DEK_C domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene peptidylprolyl isomerase Neighboring gene ncRNA Neighboring gene LIM zinc-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Pecanex-like protein
    NP_001251455.1
    • Confirmed by transcript evidence
    NP_001251456.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      10654299..10666945 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001264527.3 → NP_001251456.1  Pecanex-like protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001251456.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G4RT15
      Conserved Domains (1) summary
      pfam05041
      Location:1612 → 1839
      Pecanex_C; Pecanex protein (C-terminus)

    2. NM_001264526.2 → NP_001251455.1  Pecanex-like protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001251455.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O61825
      Conserved Domains (1) summary
      pfam05041
      Location:1586 → 1813
      Pecanex_C; Pecanex protein (C-terminus)
    Nucleotide Protein
    Heading Accession and Version

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