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    K08D8.6 CUB-like domain-containing protein;CUB_2 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178241, updated on 2-Nov-2024

    Summary

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    Official Symbol
    K08D8.6
    Official Full Name
    CUB-like domain-containing protein;CUB_2 domain-containing protein
    Primary source
    WormBase:WBGene00010660
    Locus tag
    CELE_K08D8.6
    See related
    AllianceGenome:WB:WBGene00010660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in membrane raft. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See K08D8.6 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    11
    Sequence:
    Chromosome: IV; NC_003282.8 (12887062..12890508, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CUB-like domain-containing protein Neighboring gene pseudo Neighboring gene DUF4887 domain-containing protein Neighboring gene LITAF domain-containing protein;RNA-binding protein Neighboring gene PLSCR1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An analysis of the Caenorhabditis elegans lipid raft proteome using geLC-MS/MS. Rao W, et al. J Proteomics, 2011 Feb 1. PMID 21070894
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane raft HDA PubMed 

    General protein information

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    Preferred Names
    CUB-like domain-containing protein;CUB_2 domain-containing protein
    NP_001294233.1
    • Confirmed by transcript evidence
    NP_502457.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12887062..12890508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070056.7 → NP_502457.2  CUB-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502457.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5ECH9
      Conserved Domains (1) summary
      pfam02408
      Location:22 → 139
      CUB_2; CUB-like domain

    2. NM_001307304.3 → NP_001294233.1  CUB_2 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294233.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M1Z859
    Nucleotide Protein
    Heading Accession and Version

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