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    pes-5 Patterned Expression Site [ Caenorhabditis elegans ]

    Gene ID: 174819, updated on 2-Nov-2024

    Summary

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    Official Symbol
    pes-5
    Official Full Name
    Patterned Expression Site
    Primary source
    WormBase:WBGene00003979
    Locus tag
    CELE_T27D12.4
    See related
    AllianceGenome:WB:WBGene00003979
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See pes-5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (11827930..11830020, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Ribonuclease H Neighboring gene C-type lectin domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Patterned Expression Site
    NP_001254317.1
    • Partially confirmed by transcript evidence;
      Product from WormBase gene class pes
    NP_001359621.1
    • Product from WormBase gene class pes;
      Confirmed by transcript evidence
    NP_001366978.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class pes

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      11827930..11830020 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373797.2 → NP_001359621.1  Patterned Expression Site [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F9UKU6

    2. NM_001267388.2 → NP_001254317.1  Patterned Expression Site [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254317.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EGM7

    3. NM_001381619.1 → NP_001366978.1  Patterned Expression Site [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EEB7
    Nucleotide Protein
    Heading Accession and Version

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