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    F48B9.8 RDD domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185970, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F48B9.8
    Official Full Name
    RDD domain-containing protein
    Primary source
    WormBase:WBGene00018593
    Locus tag
    CELE_F48B9.8
    See related
    AllianceGenome:WB:WBGene00018593
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human FAM8A1 (family with sequence similarity 8 member A1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F48B9.8 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Sequence:
    Chromosome: X; NC_003284.9 (2173890..2176411, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Pigment dispersing factor homolog pdf-2 Neighboring gene ZP domain-containing protein Neighboring gene C2 domain-containing protein;GTPase Activating Protein family;Ras GTPase-activating protein gap-1 Neighboring gene Carbohydrate kinase PfkB domain-containing protein Neighboring gene Tetraspanin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RDD domain-containing protein
    NP_508402.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      2173890..2176411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076001.2 → NP_508402.1  RDD domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508402.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20557
      Conserved Domains (1) summary
      cl00746
      Location:92 → 234
      RDD; RDD family
    Nucleotide Protein
    Heading Accession and Version

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