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    • Showing Current items.

    mam-2 MAM domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177854, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mam-2
    Official Full Name
    MAM domain-containing protein
    Primary source
    WormBase:WBGene00008150
    Locus tag
    CELE_C47E12.6
    See related
    AllianceGenome:WB:WBGene00008150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See mam-2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    13
    Sequence:
    Chromosome: IV; NC_003282.8 (9983195..9989678)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Dihydropyrimidinase 2 Neighboring gene Ribosomal RNA processing protein 1 homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene E1 ubiquitin-activating enzyme Neighboring gene Inorganic pyrophosphatase 1 Neighboring gene alpha-1,2-Mannosidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MAM domain-containing protein
    NP_501799.4
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9983195..9989678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069398.6 → NP_501799.4  MAM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501799.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I4M2
      Conserved Domains (2) summary
      smart00137
      Location:62 → 237
      MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
      cl27660
      Location:459 → 613
      MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    Nucleotide Protein
    Heading Accession and Version

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