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    T23B12.6 BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179226, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T23B12.6
    Official Full Name
    BTB domain-containing protein
    Primary source
    WormBase:WBGene00020721
    Locus tag
    CELE_T23B12.6
    See related
    AllianceGenome:WB:WBGene00020721
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein homooligomerization. Is expressed in several structures, including body wall musculature; intestine; non-striated muscle; pharynx; and seam cell. Orthologous to human SHKBP1 (SH3KBP1 binding protein 1) and KCTD3 (potassium channel tetramerization domain containing 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T23B12.6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (8457616..8460419, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Post-GPI attachment to proteins factor 2 Neighboring gene TransThyretin-Related family domain Neighboring gene ncRNA Neighboring gene J domain-containing protein Neighboring gene Protein MAK10 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BTB domain-containing protein
    NP_505177.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      8457616..8460419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072776.8 → NP_505177.1  BTB domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505177.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17001
      Conserved Domains (1) summary
      cd18363
      Location:18 → 103
      BTB_POZ_KCTD3-like; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 3 (KCTD3) and SH3KBP1-binding protein 1 (SHKBP1)
    Nucleotide Protein
    Heading Accession and Version

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