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    pqn-51 Prion-like-(Q/N-rich)-domain-bearing protein [ Caenorhabditis elegans ]

    Gene ID: 178893, updated on 9-Dec-2024

    Summary

    Official Symbol
    pqn-51
    Official Full Name
    Prion-like-(Q/N-rich)-domain-bearing protein
    Primary source
    WormBase:WBGene00004136
    Locus tag
    CELE_K11D12.2
    See related
    AllianceGenome:WB:WBGene00004136
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIIA complex. Orthologous to several human genes including GTF2A1 (general transcription factor IIA subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See pqn-51 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (5049607..5052214)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene RING-type domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene C2H2-type domain-containing protein Neighboring gene Coexpressed With Polycystins Neighboring gene Mitogen-activated protein kinase kinase kinase mlk-1

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of transcription factor TFIIA complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription factor TFIIA complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Prion-like-(Q/N-rich)-domain-bearing protein
    NP_001379665.1
    • Product from WormBase gene class pqn;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      5049607..5052214
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392508.1NP_001379665.1  Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44625
      Conserved Domains (2) summary
      cd07976
      Location:308354
      TFIIA_alpha_beta_like; Precursor of TFIIA alpha and beta subunits and similar proteins
      pfam03153
      Location:10354
      TFIIA; Transcription factor IIA, alpha/beta subunit