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    nirC cytochrome c55X [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879462, updated on 24-Aug-2024

    Summary

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    Gene symbol
    nirC
    Gene description
    cytochrome c55X
    Locus tag
    PA0517
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (577673..578032, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene heme d1 biosynthesis protein NirH Neighboring gene heme d1 biosynthesis protein NirG Neighboring gene heme d1 biosynthesis protein NirL Neighboring gene heme d1 biosynthesis protein NirD Neighboring gene heme d1 biosynthesis protein NirF Neighboring gene cytochrome C-551 Neighboring gene nitrite reductase Neighboring gene denitrification regulatory protein NirQ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The crystal structure of the heme d(1) biosynthesis-associated small c-type cytochrome NirC reveals mixed oligomeric states in crystallo. Klünemann T, et al. Acta Crystallogr D Struct Biol, 2020 Apr 1. PMID 32254062, Free PMC Article
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. crystal structure of NirC, a monoheme c-type cytochrome that is likely to be involved in the biosynthesis of heme d1
      Title: The crystal structure of the heme d(1) biosynthesis-associated small c-type cytochrome NirC reveals mixed oligomeric states in crystallo.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cytochrome c55X
    NP_249208.1
    • 'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      577673..578032 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249208.1 cytochrome c55X [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249208.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q51479
      Conserved Domains (1) summary
      COG2010
      Location:2 → 106
      CccA; Cytochrome c, mono- and diheme variants [Energy production and conversion]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q51479.1

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