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    ccmF cytochrome c-type biogenesis protein CcmF [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 881004, updated on 11-Sep-2024

    Summary

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    Gene symbol
    ccmF
    Gene description
    cytochrome c-type biogenesis protein CcmF
    Locus tag
    PA1480
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1605088..1607061)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene heme exporter protein CcmC Neighboring gene heme exporter protein CcmD Neighboring gene cytochrome c-type biogenesis protein CcmE Neighboring gene cytochrome c-type biogenesis protein CcmG Neighboring gene cytochrome c-type biogenesis protein CcmH Neighboring gene cytochrome c-type biogenesis protein CycH

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple phenotypic alterations caused by a c-type cytochrome maturation ccmC gene mutation in Pseudomonas aeruginosa. Baert B, et al. Microbiology (Reading), 2008 Jan. PMID 18174132
    2. ABC transporter-mediated release of a haem chaperone allows cytochrome c biogenesis. Feissner RE, et al. Mol Microbiol, 2006 Jul. PMID 16824107
    3. Escherichia coli genes required for cytochrome c maturation. Thöny-Meyer L, et al. J Bacteriol, 1995 Aug. PMID 7635817, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. reduction in the content of [Fe-S] clusters was evidenced in both ccmC and ccmF mutants.
      Title: Multiple phenotypic alterations caused by a c-type cytochrome maturation ccmC gene mutation in Pseudomonas aeruginosa.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables catalase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within bacterial-type flagellum-dependent swarming motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within bacterial-type flagellum-dependent swimming motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cytochrome complex assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within pyoverdine biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within type IV pilus-dependent motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome c-type biogenesis protein CcmF
    NP_250171.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1605088..1607061
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250171.1 cytochrome c-type biogenesis protein CcmF [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250171.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9I3N2
      Conserved Domains (1) summary
      COG1138
      Location:1 → 644
      CcmF; Cytochrome c biogenesis factor [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I3N2.1

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