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    liuR liu genes regulator [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 878723, updated on 14-Nov-2024

    Summary

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    Gene symbol
    liuR
    Gene description
    liu genes regulator
    Locus tag
    PA2016
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2206402..2206806, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene methylcrotonyl-CoA carboxylase subunit beta Neighboring gene isovaleryl-CoA dehydrogenase Neighboring gene hypothetical protein Neighboring gene multidrug efflux protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The expression of the genes involved in leucine catabolism of Pseudomonas aeruginosa is controlled by the transcriptional regulator LiuR and by the CbrAB/Crc system. Díaz-Pérez AL, et al. Res Microbiol, 2018 Jul-Aug. PMID 29787835
    2. Comparative genomics of regulation of fatty acid and branched-chain amino acid utilization in proteobacteria. Kazakov AE, et al. J Bacteriol, 2009 Jan. PMID 18820024, Free PMC Article
    3. The gnyRDBHAL cluster is involved in acyclic isoprenoid degradation in Pseudomonas aeruginosa. Díaz-Pérez AL, et al. Appl Environ Microbiol, 2004 Sep. PMID 15345388, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within isoprenoid catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of amino acid metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    liu genes regulator
    NP_250706.1
    • class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2206402..2206806 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250706.1 liu genes regulator [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250706.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A367LZL8
      Conserved Domains (1) summary
      cd04776
      Location:5 → 123
      HTH_GnyR; Helix-Turn-Helix DNA binding domain of the regulatory protein GnyR
    Nucleotide Protein
    Heading Accession and Version

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