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    pilX type 4 fimbrial biogenesis protein PilX [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877858, updated on 24-Aug-2024

    Summary

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    Gene symbol
    pilX
    Gene description
    type 4 fimbrial biogenesis protein PilX
    Locus tag
    PA4553
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (5100084..5100671)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene type 4 fimbrial biogenesis protein FimT Neighboring gene type 4 fimbrial biogenesis protein FimU Neighboring gene type 4 fimbrial biogenesis protein PilV Neighboring gene type 4 fimbrial biogenesis protein PilW Neighboring gene type 4 fimbrial biogenesis protein PilY1 Neighboring gene type 4 fimbrial biogenesis protein PilY2 Neighboring gene type 4 fimbrial biogenesis protein PilE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary and functional diversity of the Pseudomonas type IVa pilin island. Giltner CL, et al. Environ Microbiol, 2011 Jan. PMID 20738375
    2. Pseudomonas aeruginosa minor pilins are incorporated into type IV pili. Giltner CL, et al. J Mol Biol, 2010 May 7. PMID 20338182
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PilX is a group-specific factor
      Title: Evolutionary and functional diversity of the Pseudomonas type IVa pilin island.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within pilus assembly IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within type IV pilus-dependent motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in type IV pilus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    type 4 fimbrial biogenesis protein PilX
    NP_253243.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      5100084..5100671
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_253243.1 type 4 fimbrial biogenesis protein PilX [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_253243.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9HVM9
      Conserved Domains (1) summary
      COG4726
      Location:1 → 195
      PilX; Tfp pilus assembly protein PilX [Cell motility, Extracellular structures]
    Nucleotide Protein
    Heading Accession and Version

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