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    fdhE formate dehydrogenase subunit epsilon [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 880170, updated on 11-Sep-2024

    Summary

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    Gene symbol
    fdhE
    Gene description
    formate dehydrogenase subunit epsilon
    Locus tag
    PA4809
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (5395930..5396859, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene transcriptional regulator Neighboring gene selenocysteine-specific elongation factor Neighboring gene selenocysteine synthase Neighboring gene nitrate-inducible formate dehydrogenase subunit gamma Neighboring gene nitrate-inducible formate dehydrogenase subunit beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutants of Escherichia coli specifically deficient in respiratory formate dehydrogenase activity. Mandrand-Berthelot MA, et al. J Gen Microbiol, 1988 Dec. PMID 3077634
    2. Biosynthesis of the respiratory formate dehydrogenases from Escherichia coli: characterization of the FdhE protein. Lüke I, et al. Arch Microbiol, 2008 Dec. PMID 18716757
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables ferric iron binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables formate dehydrogenase (NAD+) activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within anaerobic respiration ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    formate dehydrogenase subunit epsilon
    NP_253497.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      5395930..5396859 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_253497.1 formate dehydrogenase subunit epsilon [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_253497.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A367M2G6
      Conserved Domains (1) summary
      TIGR01562
      Location:2 → 306
      FdhE; formate dehydrogenase accessory protein FdhE
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9HV00.1

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