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    dnaN DNA polymerase III subunit beta [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879244, updated on 24-Aug-2024

    Summary

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    Gene symbol
    dnaN
    Gene description
    DNA polymerase III subunit beta
    Locus tag
    PA0002
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2056..3159)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene chromosome replication initiator DnaA Neighboring gene DNA replication and repair protein RecF Neighboring gene DNA gyrase subunit B Neighboring gene lysophosphatidic acid acyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional analysis of the interaction between the mismatch repair protein MutS and the replication processivity factor β clamp in Pseudomonas aeruginosa. Monti MR, et al. DNA Repair (Amst), 2012 May 1. PMID 22365420
    2. The beta subunit of the Escherichia coli DNA polymerase III holoenzyme interacts functionally with the catalytic core in the absence of other subunits. LaDuca RJ, et al. J Biol Chem, 1986 Jun 5. PMID 3519609
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. the MutS-beta clamp interaction does not have a central role in the methylation-independent Mismatch Repair of P. aeruginosa.
      Title: Functional analysis of the interaction between the mismatch repair protein MutS and the replication processivity factor β clamp in Pseudomonas aeruginosa.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA strand elongation involved in DNA replication ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA polymerase III subunit beta
    NP_064722.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2056..3159
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_064722.1 DNA polymerase III subunit beta [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_064722.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9I7C4
      Conserved Domains (1) summary
      PRK05643
      Location:1 → 367
      PRK05643; DNA polymerase III subunit beta; Validated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I7C4.1

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