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    PA0428 ATP-dependent RNA helicase [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877822, updated on 24-Aug-2024

    Summary

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    Gene symbol
    PA0428
    Gene description
    ATP-dependent RNA helicase
    Locus tag
    PA0428
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (477886..479805, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene multidrug resistance protein MexB Neighboring gene outer membrane protein OprM Neighboring gene hypothetical protein Neighboring gene 5,10-methylenetetrahydrofolate reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The DEAD-box RNA helicase RhlE2 is a global regulator of Pseudomonas aeruginosa lifestyle and pathogenesis. Hausmann S, et al. Nucleic Acids Res, 2021 Jul 9. PMID 34151378, Free PMC Article
    2. Identification of genes involved in swarming motility using a Pseudomonas aeruginosa PAO1 mini-Tn5-lux mutant library. Overhage J, et al. J Bacteriol, 2007 Mar. PMID 17158671, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The DEAD-box RNA helicase RhlE2 is a global regulator of Pseudomonas aeruginosa lifestyle and pathogenesis.
      Title: The DEAD-box RNA helicase RhlE2 is a global regulator of Pseudomonas aeruginosa lifestyle and pathogenesis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within bacterial-type flagellum-dependent swarming motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within single-species biofilm formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase
    NP_249119.1
    • 'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      477886..479805 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249119.1 ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249119.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9I689
      Conserved Domains (1) summary
      PRK10590
      Location:1 → 470
      PRK10590; ATP-dependent RNA helicase RhlE; Provisional
    Nucleotide Protein
    Heading Accession and Version

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