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    pscD type III export protein PscD [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877924, updated on 24-Aug-2024

    Summary

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    Gene symbol
    pscD
    Gene description
    type III export protein PscD
    Locus tag
    PA1717
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1861297..1862595)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene type III export apparatus protein Neighboring gene type III secretion outer membrane protein PscC Neighboring gene type III export protein PscE Neighboring gene type III export protein PscF Neighboring gene type III export protein PscG Neighboring gene type III export protein PscH

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Exoenzyme S of Pseudomonas aeruginosa is secreted by a type III pathway. Yahr TL, et al. Mol Microbiol, 1996 Dec. PMID 8971719
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within protein secretion by the type III secretion system IGC
    Inferred from Genomic Context
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    type III export protein PscD
    NP_250408.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1861297..1862595
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250408.1 type III export protein PscD [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250408.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      P95432
      Conserved Domains (2) summary
      cl27782
      Location:164 → 415
      Yop-YscD_ppl; Inner membrane component of T3SS, periplasmic domain
      pfam16697
      Location:6 → 99
      Yop-YscD_cpl; Inner membrane component of T3SS, cytoplasmic domain
    Nucleotide Protein
    Heading Accession and Version

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