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    clpB chaperone protein ClpB [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879457, updated on 24-Aug-2024

    Summary

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    Gene symbol
    clpB
    Gene description
    chaperone protein ClpB
    Locus tag
    PA4542
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (5087408..5089972, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene tRNA-Pro Neighboring gene tRNA-Asn Neighboring gene hypothetical protein Neighboring gene pseudouridine synthase Neighboring gene competence protein ComL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutational analysis of the two ATP-binding sites in ClpB, a heat shock protein with protein-activated ATPase activity in Escherichia coli. Kim KI, et al. Biochem J, 1998 Aug 1. PMID 9677327, Free PMC Article
    2. ClpB is the Escherichia coli heat shock protein F84.1. Squires CL, et al. J Bacteriol, 1991 Jul. PMID 2066329, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables ATP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables ATP hydrolysis activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to heat ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chaperone protein ClpB
    NP_253232.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      5087408..5089972 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_253232.1 chaperone protein ClpB [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_253232.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3M5EJ86
      Conserved Domains (1) summary
      TIGR03346
      Location:6 → 852
      chaperone_ClpB; ATP-dependent chaperone ClpB
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9HVN5.1

    Gene LinkOut

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