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    SLC37A1 solute carrier family 37 member 1 [ Sus scrofa (pig) ]

    Gene ID: 100519174, updated on 3-Dec-2024

    Summary

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    Official Symbol
    SLC37A1provided by VGNC
    Official Full Name
    solute carrier family 37 member 1provided by VGNC
    Primary source
    VGNC:VGNC:98322
    See related
    Ensembl:ENSSSCG00000012087
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in lung (RPKM 6.3), ovary (RPKM 5.2) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See SLC37A1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 13 NC_010455.5 (205826948..205901824)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 13 NC_010455.4 (216297945..216352073, complement)

    Chromosome 13 - NC_010455.5Genomic Context describing neighboring genes Neighboring gene ubiquitin associated and SH3 domain containing A Neighboring gene uncharacterized LOC110256494 Neighboring gene radial spoke head component 1 Neighboring gene phosphodiesterase 9A Neighboring gene uncharacterized LOC110256496 Neighboring gene WD repeat domain 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
    2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glucose 6-phosphate:phosphate antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glucose-6-phosphate transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphate ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glucose-6-phosphate exchanger SLC37A1
    Names
    solute carrier family 37 (glycerol-3-phosphate transporter), member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010455.5 Reference Sscrofa11.1 Primary Assembly

      Range
      205826948..205901824
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021071027.1 → XP_020926686.1  glucose-6-phosphate exchanger SLC37A1 isoform X1

      UniProtKB/TrEMBL
      A0A8D0NMG1, F1SG45
      Conserved Domains (1) summary
      cl27298
      Location:99 → 509
      UhpC; Sugar phosphate permease [Carbohydrate transport and metabolism]

    2. XM_021071029.1 → XP_020926688.1  glucose-6-phosphate exchanger SLC37A1 isoform X1

      UniProtKB/TrEMBL
      A0A8D0NMG1, F1SG45
      Conserved Domains (1) summary
      cl27298
      Location:99 → 509
      UhpC; Sugar phosphate permease [Carbohydrate transport and metabolism]

    3. XM_021071030.1 → XP_020926689.1  glucose-6-phosphate exchanger SLC37A1 isoform X2

      UniProtKB/TrEMBL
      A0A8D0Z410, A0A8D1XLZ7
      Related
      ENSSSCP00000046326.2, ENSSSCT00000047526.2
      Conserved Domains (1) summary
      cl27298
      Location:99 → 506
      UhpC; Sugar phosphate permease [Carbohydrate transport and metabolism]

    4. XM_021071031.1 → XP_020926690.1  glucose-6-phosphate exchanger SLC37A1 isoform X3

      UniProtKB/TrEMBL
      A0A8D0SVX6, A0A8D1R197
      Conserved Domains (1) summary
      cl27298
      Location:99 → 506
      UhpC; Sugar phosphate permease [Carbohydrate transport and metabolism]

    5. XM_021071026.1 → XP_020926685.1  glucose-6-phosphate exchanger SLC37A1 isoform X1

      UniProtKB/TrEMBL
      A0A8D0NMG1, F1SG45
      Conserved Domains (1) summary
      cl27298
      Location:99 → 509
      UhpC; Sugar phosphate permease [Carbohydrate transport and metabolism]

    6. XM_021071025.1 → XP_020926684.1  glucose-6-phosphate exchanger SLC37A1 isoform X1

      UniProtKB/TrEMBL
      A0A8D0NMG1, F1SG45
      Related
      ENSSSCP00000012869.2, ENSSSCT00000013221.4
      Conserved Domains (1) summary
      cl27298
      Location:99 → 509
      UhpC; Sugar phosphate permease [Carbohydrate transport and metabolism]

    7. XM_021071032.1 → XP_020926691.1  glucose-6-phosphate exchanger SLC37A1 isoform X4

      UniProtKB/TrEMBL
      A0A8D1MHG6
      Conserved Domains (1) summary
      cl27298
      Location:10 → 407
      UhpC; Sugar phosphate permease [Carbohydrate transport and metabolism]

    8. XM_021071028.1 → XP_020926687.1  glucose-6-phosphate exchanger SLC37A1 isoform X1

      UniProtKB/TrEMBL
      A0A8D0NMG1, F1SG45
      Conserved Domains (1) summary
      cl27298
      Location:99 → 509
      UhpC; Sugar phosphate permease [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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