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    MAZ MYC associated zinc finger protein [ Sus scrofa (pig) ]

    Gene ID: 100622994, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MAZprovided by VGNC
    Official Full Name
    MYC associated zinc finger proteinprovided by VGNC
    Primary source
    VGNC:VGNC:107150
    See related
    Ensembl:ENSSSCG00000025321
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Also known as
    SAF-1
    Expression
    Ubiquitous expression in ovary (RPKM 86.4), lung (RPKM 44.5) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See MAZ in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (18043032..18047531)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 3 NC_010445.3 (18543783..18548329, complement)

    Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene zymogen granule protein 16 Neighboring gene kinesin family member 22 Neighboring gene proline rich transmembrane protein 2 Neighboring gene PAXIP1 associated glutamate rich protein 1 Neighboring gene major vault protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. Induction of the MMP-14 gene in macrophages of the atherosclerotic plaque: role of SAF-1 in the induction process. Ray BK, et al. Circ Res, 2004 Nov 26. PMID 15528467
    2. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
    3. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. SAF-1 transcription factor and MMP-14 coexpress in the cells of atherosclerotic plaques.
      Title: Induction of the MMP-14 gene in macrophages of the atherosclerotic plaque: role of SAF-1 in the induction process.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: myc-associated zinc finger protein
    Names
    MYC-associated zinc finger protein (purine-binding transcription factor)
    serum amyloid A activating factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

      Range
      18043032..18047531
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003354553.4 → XP_003354601.2  LOW QUALITY PROTEIN: myc-associated zinc finger protein

      UniProtKB/TrEMBL
      A0A5G2Q9H6
      Related
      ENSSSCP00000060598.1, ENSSSCT00000071842.1
      Conserved Domains (2) summary
      COG5189
      Location:305 → 362
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:283 → 303
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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