U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cpxm1 carboxypeptidase X, M14 family member 1 [ Mus musculus (house mouse) ]

    Gene ID: 56264, updated on 27-Nov-2024

    Summary

    Official Symbol
    Cpxm1provided by MGI
    Official Full Name
    carboxypeptidase X, M14 family member 1provided by MGI
    Primary source
    MGI:MGI:1934569
    See related
    Ensembl:ENSMUSG00000027408 AllianceGenome:MGI:1934569
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cpx1; Cpxm; Cpx-1
    Summary
    Predicted to enable metallopeptidase activity and zinc ion binding activity. Located in extracellular space. Is expressed in several structures, including alimentary system; brain; genitourinary system; sensory organ; and skeleton. Orthologous to human CPXM1 (carboxypeptidase X, M14 family member 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in limb E14.5 (RPKM 38.3), bladder adult (RPKM 32.5) and 18 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Cpxm1 in Genome Data Viewer
    Location:
    2 F1; 2 63.22 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (130232695..130239549, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (130390775..130397629, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene early B cell factor 4 Neighboring gene predicted gene, 39936 Neighboring gene ribosomal protein L27A pseudogene Neighboring gene RIKEN cDNA 1700020A23 gene Neighboring gene predicted gene, 54153 Neighboring gene transmembrane 239

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Gene trapped (1) 
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    NOT enables carboxypeptidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    NOT acts_upstream_of_or_within proteolysis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    probable carboxypeptidase X1
    Names
    carboxypeptidase X (M14 family)
    carboxypeptidase X 1 (M14 family)
    metallocarboxypeptidase 1
    metallocarboxypeptidase CPX-1
    NP_062670.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019696.2NP_062670.2  probable carboxypeptidase X1 precursor

      See identical proteins and their annotated locations for NP_062670.2

      Status: VALIDATED

      Source sequence(s)
      AF077738, AK132611, BY282671
      Consensus CDS
      CCDS16740.1
      UniProtKB/Swiss-Prot
      A2BI86, Q99LA3, Q9Z100
      Related
      ENSMUSP00000028897.8, ENSMUST00000028897.8
      Conserved Domains (4) summary
      cd03869
      Location:284609
      M14_CPX_like; Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup
      cd11308
      Location:613689
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
      smart00231
      Location:107263
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
      cd00057
      Location:106262
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      130232695..130239549 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)