FUT2 fucosyltransferase 2 (H blood group) [Sus scrofa (pig)] - Gene

Summary

Gene symbol: FUT2
Gene description: fucosyltransferase 2 (H blood group)
See related: Ensembl:ENSSSCG00000003145
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Biased expression in lung (RPKM 16.5), kidney (RPKM 6.8) and 4 other tissues See more
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 6

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	6	NC_010448.4 (54034666..54044891)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	6	NC_010448.3 (49782007..49792235)

Chromosome 6 - NC_010448.4 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Association analysis revealed associations between rs345476947 polymorphism in the FUT2 gene and the number of newborn piglets and weaned piglets.
Title: Association analysis of the SNP (rs345476947) in the FUT2 gene with the production and reproductive traits in pigs.
FUT1 expression levels and low FUT2 expression levels in the intestines of Sutai pigs affected FUT1 and FUT2 enzymes, the synthesis of type 2 H and type 1 H antigens, and E. coli F18 adhesion. Moreover, low FUT2 expression levels conferred resistance to E. coli F18.
Title: Differential expression of FUT1 and FUT2 in Large White, Meishan, and Sutai porcine breeds.

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in fucosylation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein glycosylation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: galactoside alpha-(1,2)-fucosyltransferase 2

Names: GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 2; alpha(1,2)FT 2; alpha-1,2-fucosyltransferase; galactoside 2-alpha-L-fucosyltransferase 2; type 1 galactoside alpha-(1,2)-fucosyltransferase FUT2; type 2 galactoside alpha-(1,2)-fucosyltransferase FUT2

NP_999234.1

EC 2.4.1.344

EC 2.4.1.69

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.