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    Tex26 testis expressed 26 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498133, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Tex26provided by RGD
    Official Full Name
    testis expressed 26provided by RGD
    Primary source
    RGD:1560846
    See related
    EnsemblRapid:ENSRNOG00000000905 AllianceGenome:RGD:1560846
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1560846
    Summary
    Predicted to be active in cytoplasm. Orthologous to human TEX26 (testis expressed 26). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 33.2), Lung (RPKM 8.9) and 2 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Tex26 in Genome Data Viewer
    Location:
    12p11
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (10610030..10641545, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (5573691..5605209, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (6671936..6711017, complement)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102551137 Neighboring gene uncharacterized LOC134481257 Neighboring gene WD40 repeat domain 95 like Neighboring gene mesenteric estrogen-dependent adipogenesis Neighboring gene ribosomal protein L28, pseudogene 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    testis-expressed protein 26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134603.1 → NP_001128075.1  testis-expressed protein 26

      See identical proteins and their annotated locations for NP_001128075.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474012
      UniProtKB/TrEMBL
      A6K164

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      10610030..10641545 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006248811.5 → XP_006248873.1  testis-expressed protein 26 isoform X1

      UniProtKB/TrEMBL
      A0A8I6G5J3
      Related
      ENSRNOP00000081142.1, ENSRNOT00000115393.2

    2. XM_017598431.3 → XP_017453920.1  testis-expressed protein 26 isoform X2

    3. XM_006248813.5 → XP_006248875.1  testis-expressed protein 26 isoform X3

    4. XM_063271574.1 → XP_063127644.1  testis-expressed protein 26 isoform X4

    RNA

    1. XR_005491661.2 RNA Sequence

    2. XR_010056409.1 RNA Sequence

    3. XR_010056408.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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