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    PPIE peptidylprolyl isomerase E [ Bos taurus (domestic cattle) ]

    Gene ID: 787681, updated on 30-Jan-2025

    Summary

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    Official Symbol
    PPIEprovided by VGNC
    Official Full Name
    peptidylprolyl isomerase Eprovided by VGNC
    Primary source
    VGNC:VGNC:55661
    See related
    EnsemblRapid:ENSBTAG00070003455
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PPIE in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (106328179..106344433, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene etoposide-induced protein 2.4 homolog Neighboring gene bone morphogenetic protein 8b Neighboring gene 3-oxoacid CoA-transferase 2 Neighboring gene hippocalcin like 4 Neighboring gene 5'-nucleotidase, cytosolic IA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein peptidyl-prolyl isomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidyl-prolyl cis-trans isomerase E
    Names
    PPIase E
    cyclophilin E
    rotamase E
    NP_001091630.1
    XP_059740916.1
    XP_059740917.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001098161.1 → NP_001091630.1  peptidyl-prolyl cis-trans isomerase E

      See identical proteins and their annotated locations for NP_001091630.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123818
      UniProtKB/Swiss-Prot
      A4FV72
      UniProtKB/TrEMBL
      A0AAA9RUF4
      Related
      ENSBTAP00070004531.1, ENSBTAT00070007865.1
      Conserved Domains (2) summary
      cd01926
      Location:140 → 298
      cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
      cd12347
      Location:8 → 82
      RRM_PPIE; RNA recognition motif (RRM) found in cyclophilin-33 (Cyp33) and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      106328179..106344433 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059884934.1 → XP_059740917.1  peptidyl-prolyl cis-trans isomerase E isoform X2

      UniProtKB/TrEMBL
      A0A3Q1M6L4

    2. XM_059884933.1 → XP_059740916.1  peptidyl-prolyl cis-trans isomerase E isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M6L4, G3MZS9
      Related
      ENSBTAP00070004532.1, ENSBTAT00070007867.1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A4FV72.1 GenPept UniProtKB/Swiss-Prot:A4FV72

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