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    CG12984 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40321, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG12984provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037042
    Locus tag
    Dmel_CG12984
    See related
    AllianceGenome:FB:FBgn0037042
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12984
    Orthologs
    all
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    Genomic context

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    See CG12984 in Genome Data Viewer
    Location:
    78A2-78A2; 3-47 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20991673..20992930)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20984773..20986030)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene skuld Neighboring gene antisense RNA:CR45944 Neighboring gene small Cajal body-specific RNA : PsiU6-40

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The origin and structural evolution of de novo genes in Drosophila. Peng J, et al. Nat Commun, 2024 Jan 27. PMID 38280868, Free PMC Article
    2. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    3. Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet. Çiçek IÖ, et al. Genetics, 2016 Mar. PMID 26801178, Free PMC Article
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 20992311-20992506 mobile_element_type = transposon:INE-1{}5887

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12984-PA
    CG12984-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20991673..20992930
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141019.3 → NP_649276.2  uncharacterized protein Dmel_CG12984, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649276.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QP06, Q9VP89

    2. NM_001300208.1 → NP_001287137.1  uncharacterized protein Dmel_CG12984, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287137.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JD62
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VP89 Q9VP89
    X2JD62 X2JD62

    Gene LinkOut

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