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    CG5382 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42618, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5382provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038950
    Locus tag
    Dmel_CG5382
    See related
    AllianceGenome:FB:FBgn0038950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5382; ZFPL1
    Summary
    Predicted to enable zinc ion binding activity. Involved in dsRNA transport. Located in endomembrane system. Is expressed in several structures, including adult head; embryonic proventriculus intermediate layer; gland; and gut section. Orthologous to human ZFPL1 (zinc finger protein like 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5382 in Genome Data Viewer
    Location:
    94A6-94A6; 3-74 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22364573..22365983, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18190295..18191705, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Secretion-associated Ras-related 1 Neighboring gene Jumonji domain containing 6 Neighboring gene uncharacterized protein Neighboring gene muted Neighboring gene RNA polymerase III subunit F Neighboring gene Pyruvate kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of potential pathways and biomarkers linked to progression in ALS. Huber RG, et al. Ann Clin Transl Neurol, 2023 Feb. PMID 36533811, Free PMC Article
    2. The endocytic pathway mediates cell entry of dsRNA to induce RNAi silencing. Saleh MC, et al. Nat Cell Biol, 2006 Aug. PMID 16862146, Free PMC Article
    3. Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. Dottorini T, et al. BMC Bioinformatics, 2011 Jan 26. PMID 21269436, Free PMC Article
    4. Comprehensively surveying structure and function of RING domains from Drosophila melanogaster. Ying M, et al. PLoS One, 2011. PMID 21912646, Free PMC Article
    5. Mapping organelle proteins and protein complexes in Drosophila melanogaster. Tan DJ, et al. J Proteome Res, 2009 Jun. PMID 19317464

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables zinc ion binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in endomembrane system HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5382-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22364573..22365983 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_170003.3 → NP_732721.1  uncharacterized protein Dmel_CG5382 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732721.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VD26
      Related
      FBpp0083630
      Conserved Domains (2) summary
      pfam07331
      Location:235 → 277
      TctB; Tripartite tricarboxylate transporter TctB family
      pfam13639
      Location:52 → 100
      zf-RING_2; Ring finger domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T9J8 Q8T9J8
    Q9VD26.1 Q9VD26

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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