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    CG7800 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40963, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG7800provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037552
    Locus tag
    Dmel_CG7800
    See related
    AllianceGenome:FB:FBgn0037552
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT23295; Dmel\CG7800
    Summary
    Is expressed in several structures, including adult head; anlage in statu nascendi; embryonic/larval midgut primordium; head epidermis primordium; and mesoderm. Orthologous to human NRROS (negative regulator of reactive oxygen species) and TSKU (tsukushi, small leucine rich proteoglycan). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG7800 in Genome Data Viewer
    Location:
    84F4-84F4; 3-48 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (8217957..8219734)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (4043679..4045456)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43303 Neighboring gene Chemosensory protein A 84a Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45551 Neighboring gene long non-coding RNA:CR45550

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fractionation profiling: a fast and versatile approach for mapping vesicle proteomes and protein-protein interactions. Borner GH, et al. Mol Biol Cell, 2014 Oct 15. PMID 25165137, Free PMC Article
    2. Endolysosomal trafficking controls yolk granule biogenesis in vitellogenic Drosophila oocytes. Yu Y, et al. PLoS Genet, 2024 Feb. PMID 38315726, Free PMC Article
    3. A Genetic Mosaic Screen Reveals Ecdysone-Responsive Genes Regulating Drosophila Oogenesis. Ables ET, et al. G3 (Bethesda), 2016 Aug 9. PMID 27226164, Free PMC Article
    4. Genetic variation in food choice behaviour of amino acid-deprived Drosophila. Toshima N, et al. J Insect Physiol, 2014 Oct. PMID 25010547
    5. Gene expression in a Drosophila model of mitochondrial disease. Fernández-Ayala DJ, et al. PLoS One, 2010 Jan 6. PMID 20066047, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG7800-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      8217957..8219734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141513.3 → NP_649770.1  uncharacterized protein Dmel_CG7800 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649770.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5U162, Q9VHV3
      Related
      FBpp0081291
      Conserved Domains (4) summary
      cd00116
      Location:131 → 334
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00031
      Location:395 → 406
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:89 → 112
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:87 → 147
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5U162 Q5U162
    Q95SP1 Q95SP1
    Q9VHV3 Q9VHV3

    Gene LinkOut

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