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    fpvI [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 882249, updated on 11-Sep-2024

    Summary

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    Official Symbol
    fpvI
    Primary source
    PseudoCap:PA2387
    Locus tag
    PA2387
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (2640392..2640871, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene acyl-homoserine lactone acylase PvdQ Neighboring gene L-ornithine N5-oxygenase Neighboring gene protein FpvR Neighboring gene pyoverdine biosynthesis protein PvdR Neighboring gene pyoverdine biosynthesis protein PvdT

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pyoverdine-mediated regulation of FpvA synthesis in Pseudomonas aeruginosa: involvement of a probable extracytoplasmic-function sigma factor, FpvI. Rédly GA, et al. J Bacteriol, 2003 Feb. PMID 12562796, Free PMC Article
    2. Siderophore-mediated cell signalling in Pseudomonas aeruginosa: divergent pathways regulate virulence factor production and siderophore receptor synthesis. Beare PA, et al. Mol Microbiol, 2003 Jan. PMID 12492864
    3. FpvIR control of fpvA ferric pyoverdine receptor gene expression in Pseudomonas aeruginosa: demonstration of an interaction between FpvI and FpvR and identification of mutations in each compromising this interaction. Rédly GA, et al. J Bacteriol, 2005 Aug. PMID 16077110, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables sigma factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables sigma factor activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables sigma factor activity ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    enables sigma factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of biological process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase sigma factor
    NP_251077.1
    • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa.

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      2640392..2640871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_251077.1 RNA polymerase sigma factor [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_251077.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q5DIV3
      Conserved Domains (1) summary
      PRK12527
      Location:1 → 159
      PRK12527; RNA polymerase sigma factor; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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