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    bfiS protein BfiS [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 880350, updated on 24-Aug-2024

    Summary

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    Gene symbol
    bfiS
    Gene description
    protein BfiS
    Locus tag
    PA4197
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4693759..4696035, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene ABC transporter Neighboring gene protein BfiR Neighboring gene acyl-CoA synthetase Neighboring gene acyl-CoA dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SagS contributes to the motile-sessile switch and acts in concert with BfiSR to enable Pseudomonas aeruginosa biofilm formation. Petrova OE, et al. J Bacteriol, 2011 Dec. PMID 21949078, Free PMC Article
    2. A novel signaling network essential for regulating Pseudomonas aeruginosa biofilm development. Petrova OE, et al. PLoS Pathog, 2009 Nov. PMID 19936057, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. SagS interacts directly with BfiS and indirectly with BfiR to enable biofilm formation.
      Title: SagS contributes to the motile-sessile switch and acts in concert with BfiSR to enable Pseudomonas aeruginosa biofilm formation.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables phosphorelay sensor kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of single-species biofilm formation on inanimate substrate IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein BfiS
    NP_252886.1
    • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4693759..4696035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252886.1 protein BfiS [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252886.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5E5R751
      Conserved Domains (3) summary
      PRK09776
      Location:314 → 522
      PRK09776; putative diguanylate cyclase; Provisional
      COG4191
      Location:502 → 753
      COG4191; Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]
      TIGR00229
      Location:268 → 390
      sensory_box; PAS domain S-box
    Nucleotide Protein
    Heading Accession and Version

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