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    Polr1C RNA polymerase I and III subunit C [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33712, updated on 9-Dec-2024

    Summary

    Official Symbol
    Polr1Cprovided by FlyBase
    Official Full Name
    RNA polymerase I and III subunit Cprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031657
    Locus tag
    Dmel_CG3756
    See related
    AllianceGenome:FB:FBgn0031657
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    AC40; CG3756; Dmel\CG3756; POLR1C; RPC40
    Summary
    Predicted to enable protein dimerization activity. Predicted to contribute to RNA polymerase I activity and RNA polymerase III activity. Predicted to be involved in tRNA transcription by RNA polymerase III and transcription by RNA polymerase I. Predicted to be part of RNA polymerase I complex and RNA polymerase III complex. Is expressed in adult head. Human ortholog(s) of this gene implicated in Treacher Collins syndrome 3 and hypomyelinating leukodystrophy 11. Orthologous to human POLR1C (RNA polymerase I and III subunit C). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Polr1C in Genome Data Viewer
    Location:
    25B5-25B5; 2-14 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (4969004..4970216)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (4969004..4970216)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene eukaryotic translation initiation factor 3 subunit i Neighboring gene Synthesis of cytochrome c oxidase Neighboring gene lethal (2) 05714 Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein L28 Neighboring gene GDP-mannose 4,6-dehydratase

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    contributes_to RNA polymerase I activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase I activity IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to RNA polymerase I activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    contributes_to RNA polymerase III activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase III activity IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to RNA polymerase III activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in tRNA transcription by RNA polymerase III ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in transcription by RNA polymerase I ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of RNA polymerase I complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of RNA polymerase I complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of RNA polymerase III complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of RNA polymerase III complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    RNA polymerase I and III subunit C
    Names
    CG3756-PA
    Polr1C-PA
    NP_608885.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      4969004..4970216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135041.3NP_608885.1  RNA polymerase I and III subunit C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608885.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VMX3
      Related
      FBpp0078633
      Conserved Domains (2) summary
      cd07032
      Location:41329
      RNAP_I_II_AC40; AC40 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III
      smart00662
      Location:53327
      RPOLD; RNA polymerases D