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    CG16853 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34771, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG16853provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0028941
    Locus tag
    Dmel_CG16853
    See related
    AllianceGenome:FB:FBgn0028941
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:BACR48E02.3; Dmel\CG16853
    Orthologs
    all
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    Genomic context

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    See CG16853 in Genome Data Viewer
    Location:
    34C4-34C4; 2-48 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13542268..13543633)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13542268..13543633)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene B4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene kuzbanian Neighboring gene long non-coding RNA:CR44973 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article
    2. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Ashburner M, et al. Genetics, 1999 Sep. PMID 10471707, Free PMC Article
    3. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG16853-PA
    CG16853-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13542268..13543633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135819.2 → NP_609663.2  uncharacterized protein Dmel_CG16853, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609663.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T459, Q9V458
      Related
      FBpp0080086, FBtr0080508
      Conserved Domains (1) summary
      pfam13886
      Location:201 → 269
      DUF4203; Domain of unknown function (DUF4203)

    2. NM_001273517.1 → NP_001260446.1  uncharacterized protein Dmel_CG16853, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260446.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T459, Q9V458
      Conserved Domains (1) summary
      pfam13886
      Location:201 → 269
      DUF4203; Domain of unknown function (DUF4203)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T459 Q8T459
    Q9V458 Q9V458

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