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    lncRNA:CR43337 long non-coding RNA:CR43337 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798544, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR43337provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43337provided by FlyBase
    Primary source
    FLYBASE:FBgn0263042
    Locus tag
    Dmel_CR43337
    See related
    AllianceGenome:FB:FBgn0263042
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:SD03580; CG32345; CG43337; CR43337; Dmel\CR43337
    Orthologs
    all
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    Genomic context

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    See lncRNA:CR43337 in Genome Data Viewer
    Location:
    61C7-61C7; 3-0.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (620695..622316, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (620695..622316, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44513 Neighboring gene long non-coding RNA:CR42719 Neighboring gene long non-coding RNA:CR43334 Neighboring gene long non-coding RNA:CR43423 Neighboring gene bantam

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • lncRNA:CR43337-RC; Dmel\lncRNA:CR43337-RC; CR43337-RC; Dmel\CR43337-RC
    • lncRNA:CR43337-RD; Dmel\lncRNA:CR43337-RD; CR43337-RD; Dmel\CR43337-RD

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      620695..622316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_182239.1 RNA Sequence

      Status: REVIEWED

    2. NR_182240.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials