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    CG6345 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41271, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG6345provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037816
    Locus tag
    Dmel_CG6345
    See related
    AllianceGenome:FB:FBgn0037816
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    149631_at; Dmel\CG6345
    Summary
    Predicted to enable N6-isopentenyladenosine methylthiotransferase activity. Predicted to be involved in mitochondrial tRNA modification and regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to be active in cytosol and mitochondrion. Is expressed in several structures, including Malpighian tubule primordium; anterior endoderm; anterior endoderm anlage; embryonic/larval midgut primordium; and mesoderm. Orthologous to human CDK5RAP1 (CDK5 regulatory subunit associated protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See CG6345 in Genome Data Viewer
    Location:
    86B4-86B4; 3-49 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10414218..10416046, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6239940..6241768, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mir-318 stem loop Neighboring gene Iron regulatory protein 1B Neighboring gene Rrp46 Neighboring gene uncharacterized protein Neighboring gene Cytochrome P450 12e1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables N6-isopentenyladenosine methylthiotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables N6-isopentenyladenosine methylthiotransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables methylthiotransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in RNA modification ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in mitochondrial tRNA modification IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of cyclin-dependent protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in tRNA modification IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrial matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG6345-PA
    NP_650002.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      10414218..10416046 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141745.4NP_650002.1  uncharacterized protein Dmel_CG6345 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650002.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VGZ1
      Related
      FBpp0081735
      Conserved Domains (3) summary
      PRK14329
      Location:88570
      PRK14329; (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
      pfam00919
      Location:93196
      UPF0004; Uncharacterized protein family UPF0004
      pfam01938
      Location:494568
      TRAM; TRAM domain