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    Idh3b Isocitrate dehydrogenase 3b [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42586, updated on 17-Dec-2024

    Summary

    Official Symbol
    Idh3bprovided by FlyBase
    Official Full Name
    Isocitrate dehydrogenase 3bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038922
    Locus tag
    Dmel_CG6439
    See related
    AllianceGenome:FB:FBgn0038922
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6439; Dmel\CG6439; Idh; IDH (CG6439)
    Summary
    Predicted to enable enzyme activator activity. Involved in autophagic cell death; response to ecdysone; and tricarboxylic acid cycle. Located in mitochondrial matrix. Is expressed in several structures, including adult head; adult heart; embryonic/larval midgut primordium; gut section; and mesoderm. Human ortholog(s) of this gene implicated in retinitis pigmentosa 46. Orthologous to human IDH3B (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Idh3b in Genome Data Viewer
    Location:
    93F14-94A1; 3-73 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22016391..22019382, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17842113..17845104, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ecdysone-induced protein 93F Neighboring gene mitofilin Neighboring gene Testicular haploid expressed gene Neighboring gene mitochondrial ribosomal protein L35 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables enzyme activator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in autophagic cell death IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in isocitrate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in response to ecdysone IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in tricarboxylic acid cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in tricarboxylic acid cycle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of isocitrate dehydrogenase complex (NAD+) ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrial matrix IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    isocitrate dehydrogenase 3b
    Names
    CG6439-PA
    CG6439-PB
    Idh3b-PA
    Idh3b-PB
    isocitrate dehydrogenase

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22016391..22019382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142743.3NP_651000.1  isocitrate dehydrogenase 3b, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651000.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VD58
      Related
      FBpp0083588
      Conserved Domains (1) summary
      cl00445
      Location:37369
      Iso_dh; Isocitrate/isopropylmalate dehydrogenase
    2. NM_001170211.1NP_001163682.1  isocitrate dehydrogenase 3b, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163682.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VD58
      Conserved Domains (1) summary
      cl00445
      Location:37369
      Iso_dh; Isocitrate/isopropylmalate dehydrogenase