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    CG2652 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31250, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG2652provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0025838
    Locus tag
    Dmel_CG2652
    See related
    AllianceGenome:FB:FBgn0025838
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG2652; EG:155E2.5
    Summary
    Predicted to enable histone binding activity. Predicted to be involved in chromatin remodeling and regulation of transcription by RNA polymerase II. Predicted to be part of NuA4 histone acetyltransferase complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG2652 in Genome Data Viewer
    Location:
    3B1-3B1; 1-1.5 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (2681987..2682932, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (2576020..2576965, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene shaggy Neighboring gene long non-coding RNA:CR45197 Neighboring gene long non-coding RNA:CR44470 Neighboring gene Helix loop helix protein 3B Neighboring gene period Neighboring gene daywake Neighboring gene Paraplegin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multifaceted roles of YEATS domain-containing proteins and novel links to neurological diseases. Yeewa R, et al. Cell Mol Life Sci, 2022 Mar 12. PMID 35279775, Free PMC Article
    2. Conserved regulators of nucleolar size revealed by global phenotypic analyses. Neumüller RA, et al. Sci Signal, 2013 Aug 20. PMID 23962978, Free PMC Article
    3. From first base: the sequence of the tip of the X chromosome of Drosophila melanogaster, a comparison of two sequencing strategies. Benos PV, et al. Genome Res, 2001 May. PMID 11337470, Free PMC Article
    4. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    5. Transcription factor networks in Drosophila melanogaster. Rhee DY, et al. Cell Rep, 2014 Sep 25. PMID 25242320, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of NuA4 histone acetyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG2652-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      2681987..2682932 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130659.2 → NP_570015.1  uncharacterized protein Dmel_CG2652 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_570015.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O97421, Q9W4X1
      Related
      FBpp0070481, FBtr0070505
      Conserved Domains (1) summary
      cl19881
      Location:26 → 120
      YEATS; YEATS family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O97421 O97421
    Q9W4X1 Q9W4X1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
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