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    RpL23 Ribosomal protein L23 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37628, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpL23provided by FlyBase
    Official Full Name
    Ribosomal protein L23provided by FlyBase
    Primary source
    FLYBASE:FBgn0010078
    Locus tag
    Dmel_CG3661
    See related
    AllianceGenome:FB:FBgn0010078
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3661; Dmel\CG3661; L14; L17; L17A; L23; RL17; Rpl17A; RpL17A; RPL17A; rpl23; Rpl23; TA01212p
    Summary
    Enables myosin binding activity. A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head and adult heart. Orthologous to human RPL23 (ribosomal protein L23). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpL23 in Genome Data Viewer
    Location:
    59B3-59B3; 2-101 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22854383..22855694)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18741906..18743217)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene inactivation no afterpotential D Neighboring gene forkhead domain 59A Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila cyclodiene resistance gene shows conserved genomic organization with vertebrate gamma-aminobutyric acidA receptors. ffrench-Constant RH, et al. J Neurochem, 1992 Oct. PMID 1328525
    2. The Drosophila melanogaster ribosomal protein L17A-encoding gene. Noselli S, et al. Gene, 1992 Sep 10. PMID 1511900
    3. New local potential useful for genome annotation and 3D modeling. Chandonia JM, et al. J Mol Biol, 2003 Sep 26. PMID 12972255
    4. Novel putative nicotinic acetylcholine receptor subunit genes, Dalpha5, Dalpha6 and Dalpha7, in Drosophila melanogaster identify a new and highly conserved target of adenosine deaminase acting on RNA-mediated A-to-I pre-mRNA editing. Grauso M, et al. Genetics, 2002 Apr. PMID 11973307, Free PMC Article
    5. DREF is required for cell and organismal growth in Drosophila and functions downstream of the nutrition/TOR pathway. Killip LE, et al. Dev Biol, 2012 Nov 15. PMID 22960233

    See all (66) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables large ribosomal subunit rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables myosin binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal protein L23
    Names
    CG3661-PA
    RpL23-PA
    ribosomal protein L17A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22854383..22855694
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079089.4 → NP_523813.1  ribosomal protein L23 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523813.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B7FNL0, P48159, Q9W1Y7
      UniProtKB/TrEMBL
      A8E792
      Related
      FBpp0071808
      Conserved Domains (1) summary
      PTZ00054
      Location:2 → 139
      PTZ00054; 60S ribosomal protein L23; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P48159.2 P48159

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