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    Syx4 Syntaxin 4 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31269, updated on 9-Dec-2024

    Summary

    Official Symbol
    Syx4provided by FlyBase
    Official Full Name
    Syntaxin 4provided by FlyBase
    Primary source
    FLYBASE:FBgn0024980
    Locus tag
    Dmel_CG2715
    See related
    AllianceGenome:FB:FBgn0024980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG2715; Dm Syx4; Dmel\CG2715; DmSyx4; EG:95B7.1; EG:95B7.11; STX4; Syx; Syx-4; syx4
    Summary
    Predicted to enable SNAP receptor activity and SNARE binding activity. Involved in regulation of synaptic assembly at neuromuscular junction and retrograde trans-synaptic signaling. Located in postsynaptic membrane. Is expressed in adult head; larval brain; and larval ventral nerve cord. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Syx4 in Genome Data Viewer
    Location:
    3B4-3B4; 1-1.5 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (2739089..2744076, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (2633122..2638109, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43494 Neighboring gene uncharacterized protein Neighboring gene tiny tim 50 Neighboring gene kin of irre Neighboring gene cramped Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables SNAP receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables SNAP receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables SNARE binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables SNARE binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in exocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in membrane fusion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of synaptic assembly at neuromuscular junction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in retrograde trans-synaptic signaling IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in synaptic vesicle docking ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in vesicle docking IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vesicle fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of SNARE complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of SNARE complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    syntaxin 4
    Names
    CG2715-PA
    CG2715-PB
    Syx4-PA
    Syx4-PB
    syntaxin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      2739089..2744076 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080318.3NP_525057.2  syntaxin 4, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_525057.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O76905, Q7KVY7, Q8MM89, Q8MM91, Q8MM96, Q8MTN2, Q8MTN5, Q8SZE9
      UniProtKB/TrEMBL
      S5W2P0
      Related
      FBpp0070471
      Conserved Domains (2) summary
      cd15848
      Location:238298
      SNARE_syntaxin1-like; SNARE motif of syntaxin 1 and related proteins
      pfam00804
      Location:93273
      Syntaxin; Syntaxin
    2. NM_001272266.1NP_001259195.1  syntaxin 4, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259195.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PIV2
      Conserved Domains (1) summary
      cd15848
      Location:162222
      SNARE_syntaxin1-like; SNARE motif of syntaxin 1 and related proteins