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    CG3308 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42527, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG3308provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038877
    Locus tag
    Dmel_CG3308
    See related
    AllianceGenome:FB:FBgn0038877
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG3308
    Summary
    Predicted to enable single-stranded DNA 3'-5' DNA exonuclease activity. Predicted to be active in cytosol. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG3308 in Genome Data Viewer
    Location:
    93D2-93D2; 3-71 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21271078..21273817, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17096800..17099539, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45798 Neighboring gene Rab1 Neighboring gene Adaptor Protein complex 2, sigma subunit Neighboring gene Isopentenyl-diphosphate delta isomerase Neighboring gene uncharacterized protein Neighboring gene SIFamide receptor Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Application of the gene search system to screen for longevity genes in Drosophila. Seong KH, et al. Biogerontology, 2001. PMID 11708722
    2. Subcellular spatial transcriptomics identifies three mechanistically different classes of localizing RNAs. Cassella L, et al. Nat Commun, 2022 Oct 26. PMID 36289223, Free PMC Article
    3. PRE-mediated bypass of two Su(Hw) insulators targets PcG proteins to a downstream promoter. Comet I, et al. Dev Cell, 2006 Jul. PMID 16824958
    4. Genetic interaction of Lobe with its modifiers in dorsoventral patterning and growth of the Drosophila eye. Singh A, et al. Genetics, 2005 Sep. PMID 15976174, Free PMC Article
    5. A misexpression screen reveals effects of bag-of-marbles and TGF beta class signaling on the Drosophila male germ-line stem cell lineage. Schulz C, et al. Genetics, 2004 Jun. PMID 15238523, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG3308-PA
    NP_650963.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      21271078..21273817 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142706.4 → NP_650963.2  uncharacterized protein Dmel_CG3308 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650963.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TA7, Q9VDC1
      Related
      FBpp0083501
      Conserved Domains (1) summary
      cd01310
      Location:38 → 317
      TatD_DNAse; TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95TA7 Q95TA7
    Q9VDC1 Q9VDC1

    Gene LinkOut

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