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    CG1792 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43727, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1792provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039860
    Locus tag
    Dmel_CG1792
    See related
    AllianceGenome:FB:FBgn0039860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1792
    Summary
    Enables DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1792 in Genome Data Viewer
    Location:
    100D1-100D1; 3-102 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (31616303..31617837)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (27442025..27443559)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Cyclin G Neighboring gene Medea Neighboring gene microtubule-associated Nat9 Neighboring gene partner of drosha Neighboring gene kekkon 6 Neighboring gene Zinc finger MYND-type containing 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global analysis of target genes of 21 members of the ZAD transcription factor family in Drosophila melanogaster. Krystel J, et al. Gene, 2013 Jan 10. PMID 23085320, Free PMC Article
    2. Structural basis of diversity and homodimerization specificity of zinc-finger-associated domains in Drosophila. Bonchuk A, et al. Nucleic Acids Res, 2021 Feb 26. PMID 33638995, Free PMC Article
    3. Twenty-seven ZAD-ZNF genes of Drosophila melanogaster are orthologous to the embryo polarity determining mosquito gene cucoid. Li M, et al. PLoS One, 2023. PMID 36595500, Free PMC Article
    4. A Drosophila pasha mutant distinguishes the canonical microRNA and mirtron pathways. Martin R, et al. Mol Cell Biol, 2009 Feb. PMID 19047376, Free PMC Article
    5. Genomic expansion and clustering of ZAD-containing C2H2 zinc-finger genes in Drosophila. Chung HR, et al. EMBO Rep, 2002 Dec. PMID 12446571, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1792-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      31616303..31617837
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143621.3 → NP_651878.1  uncharacterized protein Dmel_CG1792 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651878.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V9V8
      Related
      FBpp0085180
      Conserved Domains (4) summary
      smart00868
      Location:6 → 80
      zf-AD; Zinc-finger associated domain (zf-AD)
      sd00017
      Location:254 → 275
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:281 → 303
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:296 → 320
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V9V8 Q9V9V8

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