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    Zfp91 zinc finger protein 91 [ Mus musculus (house mouse) ]

    Gene ID: 109910, updated on 27-Nov-2024

    Summary

    Official Symbol
    Zfp91provided by MGI
    Official Full Name
    zinc finger protein 91provided by MGI
    Primary source
    MGI:MGI:104854
    See related
    Ensembl:ENSMUSG00000024695 AllianceGenome:MGI:104854
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pzf; Zfp-91; 9130014I08Rik; A530054C17Rik
    Summary
    The protein encoded by this gene is a member of the zinc finger family of proteins. The gene product contains C2H2-type domains, which are the classical zinc finger domains found in numerous nucleic acid-binding proteins. The homologous human protein has been shown to function as a regulator of the non-canonical NF-kappaB pathway in lymphotoxin-beta receptor signaling. A read-through transcript variant composed of Zfp91 and the downstream Cntf gene sequence has been identified, but it is thought to be non-coding. Read-through transcription of Zfp91 and Cntf has been observed in both human and mouse. A Zfp91-related pseudogene has also been identified on chromosome 17. [provided by RefSeq, Oct 2010]
    Expression
    Ubiquitous expression in testis adult (RPKM 19.5), bladder adult (RPKM 15.2) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Zfp91 in Genome Data Viewer
    Location:
    19 A; 19 8.73 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (12744303..12773487, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (12766939..12796123, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene kidney expressed gene 1 Neighboring gene crumbs homolog 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_45598 Neighboring gene predicted readthrough transcript (NMD candidate), 44505 Neighboring gene ciliary neurotrophic factor Neighboring gene STARR-positive B cell enhancer ABC_E11024 Neighboring gene STARR-positive B cell enhancer ABC_E4268 Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:12870708-12870906 Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:12871167-12871368 Neighboring gene STARR-positive B cell enhancer ABC_E8742 Neighboring gene STARR-positive B cell enhancer ABC_E7636 Neighboring gene leupaxin Neighboring gene ribosomal protein lateral stalk subunit P1, retrotransposed Neighboring gene olfactory receptor family 5 subfamily B member 21

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (1)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Readthrough Gm44505

    Readthrough gene: Gm44505, Included gene: Cntf

    Clone Names

    • MGC195907

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ubiquitin-protein transferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ubiquitin-protein transferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in activation of NF-kappaB-inducing kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in activation of NF-kappaB-inducing kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein K63-linked ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein K63-linked ubiquitination ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    E3 ubiquitin-protein ligase ZFP91
    Names
    RING-type E3 ubiquitin transferase ZFP91
    penta Zf protein
    zinc finger protein 91 homolog
    NP_443735.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053009.3NP_443735.2  E3 ubiquitin-protein ligase ZFP91

      See identical proteins and their annotated locations for NP_443735.2

      Status: REVIEWED

      Source sequence(s)
      AK147502, AK147560, BE947731, CJ113470
      Consensus CDS
      CCDS37927.1
      UniProtKB/Swiss-Prot
      Q3TEQ3, Q3UH61, Q62509, Q62511, Q6P219, Q6PG06, Q8BPY3, Q8C2B4, Q8CDZ3
      UniProtKB/TrEMBL
      E0CY81
      Related
      ENSMUSP00000037971.9, ENSMUST00000038627.9
      Conserved Domains (3) summary
      sd00017
      Location:349368
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:388413
      zf-H2C2_2; Zinc-finger double domain
      pfam15909
      Location:315392
      zf-C2H2_8; C2H2-type zinc ribbon

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      12744303..12773487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)