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    Gpx2 glutathione peroxidase 2 [ Mus musculus (house mouse) ]

    Gene ID: 14776, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gpx2provided by MGI
    Official Full Name
    glutathione peroxidase 2provided by MGI
    Primary source
    MGI:MGI:106609
    See related
    Ensembl:ENSMUSG00000042808 AllianceGenome:MGI:106609
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GI-GPx; GPx-GI; GSHPx-2; GSHPx-GI
    Summary
    The protein encoded by this gene belongs to the glutathione peroxidase family, members of which catalyze the reduction of organic hydroperoxides and hydrogen peroxide (H2O2) by glutathione, and thereby protect cells against oxidative damage. Several isozymes of this gene family exist in vertebrates, which vary in cellular location and substrate specificity. This isozyme is predominantly expressed in the gastrointestinal tract in rodents, is localized in the cytoplasm, and whose preferred substrate is hydrogen peroxide. Knockout studies in mice lacking this gene suggest a role for this isozyme in intestinal inflammation and colon cancer development. This isozyme is also a selenoprotein, containing the rare amino acid selenocysteine (Sec) at its active site. Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. A pseudogene of this locus has been identified on chromosome 7. [provided by RefSeq, Aug 2017]
    Expression
    Biased expression in large intestine adult (RPKM 1086.3), small intestine adult (RPKM 241.0) and 3 other tissues See more
    Orthologs
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    Genomic context

    See Gpx2 in Genome Data Viewer
    Location:
    12 C3; 12 33.73 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (76839109..76842328, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (76792335..76795554, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing, family G (with RhoGef domain) member 3 Neighboring gene STARR-seq mESC enhancer starr_32530 Neighboring gene STARR-positive B cell enhancer ABC_E8490 Neighboring gene spectrin beta, erythrocytic Neighboring gene STARR-seq mESC enhancer starr_32532 Neighboring gene STARR-seq mESC enhancer starr_32533 Neighboring gene churchill domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_32534 Neighboring gene RAB15, member RAS oncogene family Neighboring gene STARR-positive B cell enhancer ABC_E2389 Neighboring gene predicted gene, 34988 Neighboring gene farnesyltransferase, CAAX box, beta Neighboring gene predicted gene, 46357

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables glutathione peroxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables glutathione peroxidase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables glutathione peroxidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables glutathione peroxidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables phospholipid-hydroperoxide glutathione peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phospholipid-hydroperoxide glutathione peroxidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in intercellular bridge ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitotic spindle ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    glutathione peroxidase 2
    Names
    GPx-2
    glutathione peroxidase-gastrointestinal
    intestinal GPx
    phospholipid hydroperoxide glutathione peroxidase GPX2
    NP_109602.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030677.2NP_109602.2  glutathione peroxidase 2

      See identical proteins and their annotated locations for NP_109602.2

      Status: REVIEWED

      Source sequence(s)
      AK131940, BX629737, CF612186
      Consensus CDS
      CCDS25996.1
      UniProtKB/Swiss-Prot
      Q3V2B2, Q9JHC0
      UniProtKB/TrEMBL
      A0A0R4J111
      Related
      ENSMUSP00000081012.5, ENSMUST00000082431.6
      Conserved Domains (1) summary
      cd00340
      Location:7182
      GSH_Peroxidase; Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      76839109..76842328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)