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    CG13060 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39802, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG13060provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036606
    Locus tag
    Dmel_CG13060
    See related
    AllianceGenome:FB:FBgn0036606
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE40431; Dmel\CG13060
    Orthologs
    all
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    Genomic context

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    See CG13060 in Genome Data Viewer
    Location:
    72E1-72E1; 3-44 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16319856..16320454)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16312956..16313554)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Neuropeptide-like precursor 3 Neighboring gene antisense RNA:CR45663 Neighboring gene long non-coding RNA:CR45664 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The conserved microRNA miR-8 tunes atrophin levels to prevent neurodegeneration in Drosophila. Karres JS, et al. Cell, 2007 Oct 5. PMID 17923093
    2. A Drosophila model for the Zellweger spectrum of peroxisome biogenesis disorders. Mast FD, et al. Dis Model Mech, 2011 Sep. PMID 21669930, Free PMC Article
    3. Annotation and analysis of low-complexity protein families of Anopheles gambiae that are associated with cuticle. Cornman RS, et al. Insect Mol Biol, 2009 Oct. PMID 19754739, Free PMC Article
    4. Analysis of the Otd-dependent transcriptome supports the evolutionary conservation of CRX/OTX/OTD functions in flies and vertebrates. Ranade SS, et al. Dev Biol, 2008 Mar 15. PMID 18241855, Free PMC Article
    5. Functional analysis of PGRP-LA in Drosophila immunity. Gendrin M, et al. PLoS One, 2013. PMID 23922788, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13060-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      16319856..16320454
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140616.3 → NP_648873.1  uncharacterized protein Dmel_CG13060 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648873.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VV30
      Related
      FBpp0075129
      Conserved Domains (1) summary
      pfam04527
      Location:25 → 73
      Retinin_C; Drosophila Retinin like protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VV30 Q9VV30

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