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    TPX2 (targeting protein for Xklp2) protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831404, updated on 18-Sep-2024

    Summary

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    Official Full Name
    TPX2 (targeting protein for Xklp2) protein family
    Primary source
    TAIR:AT5G15510
    Locus tag
    AT5G15510
    See related
    Araport:AT5G15510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20K14.120; T20K14_120
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (5033933..5036824)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene UDP-glucose 6-dehydrogenase family protein Neighboring gene Ankyrin repeat family protein Neighboring gene Ribosomal protein S19e family protein Neighboring gene biotin carboxyl carrier protein 2 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. HY5 inhibits lateral root initiation in Arabidopsis through negative regulation of the microtubule-stabilizing protein TPXL5. Qian Y, et al. Plant Cell, 2023 Mar 15. PMID 36512471, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. HY5 inhibits lateral root initiation in Arabidopsis through negative regulation of the microtubule-stabilizing protein TPXL5.
      Title: HY5 inhibits lateral root initiation in Arabidopsis through negative regulation of the microtubule-stabilizing protein TPXL5.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001203387.1

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in regulation of mitotic spindle organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in spindle IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    TPX2 (targeting protein for Xklp2) protein family
    NP_001190316.1
    • TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT3G01015.1).
    NP_197055.2
    • TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT3G01015.1); Has 1184 Blast hits to 1000 proteins in 137 species: Archae - 0; Bacteria - 15; Metazoa - 507; Fungi - 52; Plants - 301; Viruses - 3; Other Eukaryotes - 306 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5033933..5036824
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343403.1 → NP_001332458.1  TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGZ9, Q9LF31

    2. NM_121555.3 → NP_197055.2  TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K9T9, Q9LF31
      Conserved Domains (1) summary
      pfam06886
      Location:388 → 442
      TPX2; Targeting protein for Xklp2 (TPX2)

    3. NM_001343404.1 → NP_001332457.1  TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGZ9, Q9LF31

    4. NM_001203387.1 → NP_001190316.1  TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K9U0, Q9LF31
      Conserved Domains (1) summary
      pfam06886
      Location:388 → 442
      TPX2; Targeting protein for Xklp2 (TPX2)
    Nucleotide Protein
    Heading Accession and Version

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