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    CcdA cytochrome c biogenesis protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835517, updated on 18-Sep-2024

    Summary

    Official Symbol
    CcdA
    Official Full Name
    cytochrome c biogenesis protein family
    Primary source
    TAIR:AT5G54290
    Locus tag
    AT5G54290
    See related
    Araport:AT5G54290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.
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    Genomic context

    See CcdA in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (22051034..22054028)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DNA repair and meiosis protein (Mre11) Neighboring gene light-harvesting chlorophyll B-binding protein 3 Neighboring gene myosin 2 Neighboring gene cotton fiber-like protein (DUF761) Neighboring gene ncRNA Neighboring gene ARF-GAP domain 5

    General gene information

    NM_124809.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast thylakoid PubMed 
    located_in plastid thylakoid membrane PubMed 

    General protein information

    Preferred Names
    cytochrome c biogenesis protein family
    NP_001190537.1
    • CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834).
    NP_200240.1
    • CcdA; CONTAINS InterPro DOMAIN/s: Cytochrome c assembly protein, transmembrane domain (InterPro:IPR003834); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22051034..22054028
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203608.1NP_001190537.1  cytochrome c biogenesis protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190537.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654GBE0, F4K0A8
      Conserved Domains (1) summary
      cl21514
      Location:137344
      TauE; Sulfite exporter TauE/SafE
    2. NM_124809.3NP_200240.1  cytochrome c biogenesis protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200240.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBH9, Q93Y53, Q9M5P3
      UniProtKB/TrEMBL
      A0A654GBE0
      Conserved Domains (1) summary
      cl21514
      Location:136343
      TauE; Sulfite exporter TauE/SafE
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