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    LINC02192 long intergenic non-protein coding RNA 2192 [ Homo sapiens (human) ]

    Gene ID: 100507534, updated on 10-Dec-2024

    Summary

    Official Symbol
    LINC02192provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2192provided by HGNC
    Primary source
    HGNC:HGNC:53054
    See related
    Ensembl:ENSG00000261325 AllianceGenome:HGNC:53054
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC02192 in Genome Data Viewer
    Location:
    16q12.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (47849314..47887130, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (53646123..53683938, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (47883225..47921041, complement)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene phosphorylase kinase regulatory subunit beta Neighboring gene NADH:ubiquinone oxidoreductase subunit A5 pseudogene 11 Neighboring gene NANOG hESC enhancer GRCh37_chr16:47660051-47660552 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:47752345-47752845 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr16:47767625-47768824 Neighboring gene uncharacterized LOC105371236 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10787 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10788 Neighboring gene NANOG hESC enhancer GRCh37_chr16:47882414-47883106 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:47898419-47899379 Neighboring gene long intergenic non-protein coding RNA 2133 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr16:47920785-47921984 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr16:47922340-47923153 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:47937837-47938338 Neighboring gene uncharacterized LOC124903685 Neighboring gene uncharacterized LOC105371237

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110649.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC141846, BC039433
      Related
      ENST00000570024.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      47849314..47887130 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      53646123..53683938 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)