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    LINC01362 long intergenic non-protein coding RNA 1362 [ Homo sapiens (human) ]

    Gene ID: 103283057, updated on 10-Dec-2024

    Summary

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    Official Symbol
    LINC01362provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1362provided by HGNC
    Primary source
    HGNC:HGNC:50596
    See related
    Ensembl:ENSG00000230817 AllianceGenome:HGNC:50596
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LINC01362 in Genome Data Viewer
    Location:
    1p31.1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (82903183..83166815)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (82743551..83007120)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (83368866..83632498)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378814 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:83240976-83242175 Neighboring gene uncharacterized LOC107985396 Neighboring gene VISTA enhancer hs442 Neighboring gene long intergenic non-protein coding RNA 1361 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1241 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:83633156-83633656 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:83633657-83634157 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:83647525-83648108 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:83728934-83729516 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:83729517-83730099 Neighboring gene uncharacterized LOC105378816 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:83893396-83893919 Neighboring gene long intergenic non-protein coding RNA 1712

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide association study of executive function in a multi-ethnic cohort implicates LINC01362: Results from the northern Manhattan study. Dueker N, et al. Neurobiol Aging, 2023 Mar. PMID 36658081, Free PMC Article
    2. A comprehensive survey of non-canonical splice sites in the human transcriptome. Parada GE, et al. Nucleic Acids Res, 2014. PMID 25123659, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Genome-wide association study of executive function in a multi-ethnic cohort implicates LINC01362: Results from the northern Manhattan study.
      Title: Genome-wide association study of executive function in a multi-ethnic cohort implicates LINC01362: Results from the northern Manhattan study.
    Submit: New GeneRIF Correction

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_147074.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC043539
      Related
      ENST00000452901.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      82903183..83166815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      82743551..83007120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials