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    Npy2r neuropeptide Y receptor Y2 [ Mus musculus (house mouse) ]

    Gene ID: 18167, updated on 17-Dec-2024

    Summary

    Official Symbol
    Npy2rprovided by MGI
    Official Full Name
    neuropeptide Y receptor Y2provided by MGI
    Primary source
    MGI:MGI:108418
    See related
    Ensembl:ENSMUSG00000028004 AllianceGenome:MGI:108418
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    NPY2-R
    Summary
    Enables peptide YY receptor activity. Acts upstream of or within adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway. Located in non-motile cilium. Is active in cilium. Is expressed in central nervous system; dorsal root ganglion; eye; and metanephros. Human ortholog(s) of this gene implicated in Huntington's disease; morbid obesity; and obesity. Orthologous to human NPY2R (neuropeptide Y receptor Y2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in adrenal adult (RPKM 1.5), genital fat pad adult (RPKM 1.1) and 11 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Npy2r in Genome Data Viewer
    Location:
    3 E3; 3 36.49 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (82445688..82455404, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (82538383..82548989, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_08033 Neighboring gene predicted gene, 57713 Neighboring gene STARR-seq mESC enhancer starr_08035 Neighboring gene STARR-positive B cell enhancer mm9_chr3:82161796-82162097 Neighboring gene STARR-seq mESC enhancer starr_08038 Neighboring gene microtubule-associated protein 9 Neighboring gene predicted gene, 29999 Neighboring gene STARR-seq mESC enhancer starr_08040 Neighboring gene STARR-seq mESC enhancer starr_08041 Neighboring gene RNA binding motif protein 46

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC124241, MGC124242, MGC124244

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables neuropeptide Y receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables neuropeptide Y receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables peptide YY receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables peptide YY receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in behavioral fear response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cardiac left ventricle morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cardiac left ventricle morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cAMP-mediated signaling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of excitatory postsynaptic potential ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of feeding behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of nervous system process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of synaptic transmission ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of synaptic transmission, glutamatergic ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in nitric oxide mediated signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in outflow tract morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in outflow tract morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cell-substrate adhesion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of circadian sleep/wake cycle, non-REM sleep ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of dopamine secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of peptide secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of smooth muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in secretion ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cilium ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in non-motile cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    neuropeptide Y receptor type 2
    Names
    NPY-Y2 receptor
    Y2 receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205099.2NP_001192028.1  neuropeptide Y receptor type 2 isoform 2

      See identical proteins and their annotated locations for NP_001192028.1

      Status: VALIDATED

      Source sequence(s)
      AC091478
      Consensus CDS
      CCDS57219.1
      UniProtKB/TrEMBL
      Q3SWR9
      Related
      ENSMUSP00000138559.2, ENSMUST00000182181.8
      Conserved Domains (1) summary
      pfam00001
      Location:30212
      7tm_1; 7 transmembrane receptor (rhodopsin family)
    2. NM_001410443.1NP_001397372.1  neuropeptide Y receptor type 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC091478
      UniProtKB/Swiss-Prot
      F7C6W7, P97295, Q8BWV1
      Related
      ENSMUSP00000029633.5, ENSMUST00000029633.5
    3. NM_001410444.1NP_001397373.1  neuropeptide Y receptor type 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC091478
      UniProtKB/Swiss-Prot
      F7C6W7, P97295, Q8BWV1
      Related
      ENSMUSP00000138282.2, ENSMUST00000182831.2
    4. NM_001410445.1NP_001397374.1  neuropeptide Y receptor type 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC091478
      UniProtKB/Swiss-Prot
      F7C6W7, P97295, Q8BWV1
    5. NM_008731.4NP_032757.2  neuropeptide Y receptor type 2 isoform 1

      See identical proteins and their annotated locations for NP_032757.2

      Status: VALIDATED

      Source sequence(s)
      AC091478
      Consensus CDS
      CCDS59646.1
      UniProtKB/Swiss-Prot
      F7C6W7, P97295, Q8BWV1
      Related
      ENSMUSP00000096595.5, ENSMUST00000098997.5
      Conserved Domains (1) summary
      cd15399
      Location:51336
      7tmA_NPY2R; neuropeptide Y receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      82445688..82455404 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)